00001 /* 00002 * averagingKernel.h 00003 * 00004 * Created on: Apr 30, 2010 00005 * Author: Brenda Javornik (e-mail: brendaj (at) nwra.com) 00006 */ 00007 00008 #ifndef AVERAGINGKERNEL_H_ 00009 #define AVERAGINGKERNEL_H_ 00010 00011 #include "matrix.h" 00012 00013 #define PULLING_COLUMNS 1 00014 00015 void initializeAvgKernelCalculation(char *AvgKernInputLine, int maxDepth); 00016 00017 void freeAvgKernelCalculation(); 00018 00019 bool subsetKernels(); 00020 00021 bool calcAvgKernelCov(); 00022 00023 int getNumberOfAveragingKernels(); 00024 00025 int getAvgKernelDepth(int i); 00026 00027 MATRIX selectKernels(MATRIX m); 00028 00029 #endif /* AVERAGINGKERNEL_H_ */